Phylogenomics
- The “Genomics for Australian Plants” project is working on the phylogenomics of Australian plant species.
- Link to project details: https://www.genomicsforaustralianplants.com/phylogenomics/
- The project will likely use some aspects of the tool HybPiper: https://github.com/mossmatters/HybPiper
- A great set of tutorial material is available here: https://github.com/mossmatters/KewHybSeqWorkshop including how to assemble contigs with HybPiper, alignment, and phylogenomics.
- This is a clear description of using HypPiper in a computer cluster with Slurm commands: https://uribeconvers.wordpress.com/2017/04/24/377/